Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb3Q91XZ7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb3Q91XZ7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb3Q91XZ7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb3Q91XZ7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Pcdhb3Q91XZ7 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb3Q91XZ7 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb3Q91XZ7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb3Q91XZ7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb3Q91XZ7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb3Q91XZ7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb3Q91XZ7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb3Q91XZ7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb3Q91XZ7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb3Q91XZ7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb3Q91XZ7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.94■□□□□ 0.46
Pcdhb3Q91XZ7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
Pcdhb3Q91XZ7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb3Q91XZ7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb3Q91XZ7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb3Q91XZ7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb3Q91XZ7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb3Q91XZ7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb3Q91XZ7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb3Q91XZ7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb3Q91XZ7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb3Q91XZ7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb3Q91XZ7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb3Q91XZ7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb3Q91XZ7 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.92■□□□□ 0.46
Pcdhb3Q91XZ7 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.92■□□□□ 0.46
Pcdhb3Q91XZ7 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.92■□□□□ 0.46
Pcdhb3Q91XZ7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.92■□□□□ 0.46
Pcdhb3Q91XZ7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb3Q91XZ7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Pcdhb3Q91XZ7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb3Q91XZ7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb3Q91XZ7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms