Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ddx41Q91VN6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx41Q91VN6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx41Q91VN6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx41Q91VN6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx41Q91VN6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx41Q91VN6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ddx41Q91VN6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx41Q91VN6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx41Q91VN6 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.6■□□□□ 0.89
Ddx41Q91VN6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.6■□□□□ 0.89
Ddx41Q91VN6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx41Q91VN6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx41Q91VN6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx41Q91VN6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx41Q91VN6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx41Q91VN6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx41Q91VN6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ddx41Q91VN6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx41Q91VN6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx41Q91VN6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx41Q91VN6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx41Q91VN6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx41Q91VN6 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.58■□□□□ 0.89
Ddx41Q91VN6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx41Q91VN6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Ddx41Q91VN6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx41Q91VN6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.58■□□□□ 0.89
Ddx41Q91VN6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Ddx41Q91VN6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ddx41Q91VN6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ddx41Q91VN6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx41Q91VN6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx41Q91VN6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx41Q91VN6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx41Q91VN6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Ddx41Q91VN6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx41Q91VN6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Gm18666-201ENSMUST00000190039 958 ntBASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.56■□□□□ 0.88
Ddx41Q91VN6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx41Q91VN6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Gm10698-201ENSMUST00000182663 604 ntBASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx41Q91VN6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms