Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc44a4Q91VA1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Slc44a4Q91VA1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc44a4Q91VA1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Slc44a4Q91VA1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc44a4Q91VA1 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.28■■□□□ 1
Slc44a4Q91VA1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc44a4Q91VA1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc44a4Q91VA1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Slc44a4Q91VA1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.28■■□□□ 1
Slc44a4Q91VA1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Slc44a4Q91VA1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc44a4Q91VA1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.28■■□□□ 1
Slc44a4Q91VA1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.28■■□□□ 1
Slc44a4Q91VA1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc44a4Q91VA1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.28■■□□□ 1
Slc44a4Q91VA1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc44a4Q91VA1 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.28■■□□□ 1
Slc44a4Q91VA1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc44a4Q91VA1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc44a4Q91VA1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc44a4Q91VA1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Slc44a4Q91VA1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc44a4Q91VA1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc44a4Q91VA1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc44a4Q91VA1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Slc44a4Q91VA1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc44a4Q91VA1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Slc44a4Q91VA1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc44a4Q91VA1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Slc44a4Q91VA1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc44a4Q91VA1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Slc44a4Q91VA1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Slc44a4Q91VA1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 Gm38027-201ENSMUST00000192315 235 ntBASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a4Q91VA1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc44a4Q91VA1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc44a4Q91VA1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc44a4Q91VA1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc44a4Q91VA1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc44a4Q91VA1 Gm18959-201ENSMUST00000208954 655 ntBASIC21.25■□□□□ 0.99
Slc44a4Q91VA1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc44a4Q91VA1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc44a4Q91VA1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc44a4Q91VA1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Slc44a4Q91VA1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Slc44a4Q91VA1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Slc44a4Q91VA1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Slc44a4Q91VA1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc44a4Q91VA1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.24■□□□□ 0.99
Slc44a4Q91VA1 Gm21362-201ENSMUST00000194272 928 ntBASIC21.24■□□□□ 0.99
Slc44a4Q91VA1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc44a4Q91VA1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc44a4Q91VA1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc44a4Q91VA1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc44a4Q91VA1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc44a4Q91VA1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Slc44a4Q91VA1 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.23■□□□□ 0.99
Slc44a4Q91VA1 Gm18032-201ENSMUST00000222541 538 ntBASIC21.23■□□□□ 0.99
Slc44a4Q91VA1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc44a4Q91VA1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc44a4Q91VA1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc44a4Q91VA1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc44a4Q91VA1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc44a4Q91VA1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc44a4Q91VA1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.22■□□□□ 0.99
Slc44a4Q91VA1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc44a4Q91VA1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc44a4Q91VA1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc44a4Q91VA1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc44a4Q91VA1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc44a4Q91VA1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc44a4Q91VA1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc44a4Q91VA1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc44a4Q91VA1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Slc44a4Q91VA1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc44a4Q91VA1 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.21■□□□□ 0.99
Slc44a4Q91VA1 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.21■□□□□ 0.99
Slc44a4Q91VA1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Slc44a4Q91VA1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc44a4Q91VA1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc44a4Q91VA1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc44a4Q91VA1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc44a4Q91VA1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Slc44a4Q91VA1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms