Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tram1Q91V04 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Tram1Q91V04 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.5■□□□□ 0.07
Tram1Q91V04 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Tram1Q91V04 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.5■□□□□ 0.07
Tram1Q91V04 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tram1Q91V04 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tram1Q91V04 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.49■□□□□ 0.07
Tram1Q91V04 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tram1Q91V04 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Tram1Q91V04 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tram1Q91V04 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Tram1Q91V04 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.49■□□□□ 0.07
Tram1Q91V04 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tram1Q91V04 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Tram1Q91V04 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Tram1Q91V04 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.49■□□□□ 0.07
Tram1Q91V04 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.49■□□□□ 0.07
Tram1Q91V04 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.49■□□□□ 0.07
Tram1Q91V04 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tram1Q91V04 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tram1Q91V04 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tram1Q91V04 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tram1Q91V04 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Tram1Q91V04 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Tram1Q91V04 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.48■□□□□ 0.07
Tram1Q91V04 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Tram1Q91V04 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.48■□□□□ 0.07
Tram1Q91V04 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.48■□□□□ 0.07
Tram1Q91V04 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.48■□□□□ 0.07
Tram1Q91V04 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Tram1Q91V04 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tram1Q91V04 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tram1Q91V04 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tram1Q91V04 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Tram1Q91V04 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tram1Q91V04 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tram1Q91V04 Gm27801-201ENSMUST00000184174 223 ntBASIC15.47■□□□□ 0.07
Tram1Q91V04 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tram1Q91V04 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tram1Q91V04 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tram1Q91V04 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tram1Q91V04 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tram1Q91V04 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tram1Q91V04 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tram1Q91V04 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Tram1Q91V04 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Tram1Q91V04 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.46■□□□□ 0.07
Tram1Q91V04 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.46■□□□□ 0.07
Tram1Q91V04 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.46■□□□□ 0.07
Tram1Q91V04 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Tram1Q91V04 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tram1Q91V04 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms