Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh18Q8VHR0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh18Q8VHR0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcdh18Q8VHR0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.33■□□□□ 0.37
Pcdh18Q8VHR0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh18Q8VHR0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh18Q8VHR0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcdh18Q8VHR0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh18Q8VHR0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh18Q8VHR0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh18Q8VHR0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh18Q8VHR0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh18Q8VHR0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh18Q8VHR0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms