Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.46■□□□□ 0.39
Vps4aQ8VEJ9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4aQ8VEJ9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4aQ8VEJ9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Vps4aQ8VEJ9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.46■□□□□ 0.38
Vps4aQ8VEJ9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Gm7290-201ENSMUST00000104990 617 ntBASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Gm12918-201ENSMUST00000120234 636 ntBASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Gm15710-201ENSMUST00000121821 636 ntBASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Gm5075-201ENSMUST00000196916 622 ntBASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4aQ8VEJ9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps4aQ8VEJ9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4aQ8VEJ9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4aQ8VEJ9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4aQ8VEJ9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps4aQ8VEJ9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps4aQ8VEJ9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.44■□□□□ 0.38
Vps4aQ8VEJ9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4aQ8VEJ9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.44■□□□□ 0.38
Vps4aQ8VEJ9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4aQ8VEJ9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.44■□□□□ 0.38
Vps4aQ8VEJ9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4aQ8VEJ9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4aQ8VEJ9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps4aQ8VEJ9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Gm6365-201ENSMUST00000054711 744 ntBASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps4aQ8VEJ9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4aQ8VEJ9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Vps4aQ8VEJ9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps4aQ8VEJ9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.4■□□□□ 0.38
Vps4aQ8VEJ9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Vps4aQ8VEJ9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms