Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkd2Q8VE28 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkd2Q8VE28 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkd2Q8VE28 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkd2Q8VE28 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkd2Q8VE28 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkd2Q8VE28 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkd2Q8VE28 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.39■□□□□ 0.21
Nkd2Q8VE28 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkd2Q8VE28 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkd2Q8VE28 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkd2Q8VE28 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkd2Q8VE28 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkd2Q8VE28 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkd2Q8VE28 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkd2Q8VE28 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkd2Q8VE28 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkd2Q8VE28 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.37■□□□□ 0.21
Nkd2Q8VE28 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkd2Q8VE28 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nkd2Q8VE28 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkd2Q8VE28 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkd2Q8VE28 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.37■□□□□ 0.21
Nkd2Q8VE28 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkd2Q8VE28 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.37■□□□□ 0.21
Nkd2Q8VE28 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkd2Q8VE28 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms