Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf8Q8VC56 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf8Q8VC56 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf8Q8VC56 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rnf8Q8VC56 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.34■□□□□ 0.37
Rnf8Q8VC56 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.34■□□□□ 0.37
Rnf8Q8VC56 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.34■□□□□ 0.37
Rnf8Q8VC56 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf8Q8VC56 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf8Q8VC56 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf8Q8VC56 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.34■□□□□ 0.37
Rnf8Q8VC56 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf8Q8VC56 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
Rnf8Q8VC56 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf8Q8VC56 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf8Q8VC56 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf8Q8VC56 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Rnf8Q8VC56 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf8Q8VC56 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Gm12933-201ENSMUST00000120203 872 ntBASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf8Q8VC56 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.31■□□□□ 0.36
Rnf8Q8VC56 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf8Q8VC56 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.3■□□□□ 0.36
Rnf8Q8VC56 Gm37179-201ENSMUST00000194862 823 ntBASIC17.3■□□□□ 0.36
Rnf8Q8VC56 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf8Q8VC56 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf8Q8VC56 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf8Q8VC56 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf8Q8VC56 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf8Q8VC56 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf8Q8VC56 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf8Q8VC56 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.3■□□□□ 0.36
Rnf8Q8VC56 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf8Q8VC56 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf8Q8VC56 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.29■□□□□ 0.36
Rnf8Q8VC56 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf8Q8VC56 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf8Q8VC56 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rnf8Q8VC56 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf8Q8VC56 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rnf8Q8VC56 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf8Q8VC56 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf8Q8VC56 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf8Q8VC56 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms