Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Gm43173-201ENSMUST00000202246 593 ntBASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Gm45417-201ENSMUST00000209533 758 ntBASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slf1Q8R3P9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.18■□□□□ 0.5
Slf1Q8R3P9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slf1Q8R3P9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slf1Q8R3P9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slf1Q8R3P9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slf1Q8R3P9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Slf1Q8R3P9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slf1Q8R3P9 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.18■□□□□ 0.5
Slf1Q8R3P9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slf1Q8R3P9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slf1Q8R3P9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slf1Q8R3P9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slf1Q8R3P9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Smad6-203ENSMUST00000179458 273 ntBASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slf1Q8R3P9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Gm6139-201ENSMUST00000079261 882 ntBASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slf1Q8R3P9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Haglr-201ENSMUST00000100000 2085 ntBASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slf1Q8R3P9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.14■□□□□ 0.5
Slf1Q8R3P9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Slf1Q8R3P9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slf1Q8R3P9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slf1Q8R3P9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slf1Q8R3P9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slf1Q8R3P9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slf1Q8R3P9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Slf1Q8R3P9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slf1Q8R3P9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slf1Q8R3P9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slf1Q8R3P9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Slf1Q8R3P9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms