Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.29■□□□□ 0.68
Nup58Q8R332 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup58Q8R332 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup58Q8R332 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nup58Q8R332 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup58Q8R332 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup58Q8R332 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup58Q8R332 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup58Q8R332 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.28■□□□□ 0.68
Nup58Q8R332 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nup58Q8R332 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nup58Q8R332 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup58Q8R332 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nup58Q8R332 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
Nup58Q8R332 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup58Q8R332 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.27■□□□□ 0.68
Nup58Q8R332 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nup58Q8R332 Gm8969-201ENSMUST00000199694 526 ntBASIC19.27■□□□□ 0.68
Nup58Q8R332 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup58Q8R332 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nup58Q8R332 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nup58Q8R332 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup58Q8R332 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
Nup58Q8R332 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup58Q8R332 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup58Q8R332 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup58Q8R332 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nup58Q8R332 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Nup58Q8R332 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nup58Q8R332 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup58Q8R332 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.26■□□□□ 0.67
Nup58Q8R332 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup58Q8R332 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nup58Q8R332 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.25■□□□□ 0.67
Nup58Q8R332 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup58Q8R332 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup58Q8R332 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup58Q8R332 Gm13146-201ENSMUST00000118508 780 ntBASIC19.25■□□□□ 0.67
Nup58Q8R332 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nup58Q8R332 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nup58Q8R332 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.25■□□□□ 0.67
Nup58Q8R332 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.25■□□□□ 0.67
Nup58Q8R332 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup58Q8R332 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup58Q8R332 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup58Q8R332 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.25■□□□□ 0.67
Nup58Q8R332 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup58Q8R332 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.25■□□□□ 0.67
Nup58Q8R332 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup58Q8R332 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup58Q8R332 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.24■□□□□ 0.67
Nup58Q8R332 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 Gm10602-201ENSMUST00000098239 609 ntBASIC19.24■□□□□ 0.67
Nup58Q8R332 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nup58Q8R332 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.24■□□□□ 0.67
Nup58Q8R332 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nup58Q8R332 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nup58Q8R332 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup58Q8R332 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup58Q8R332 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup58Q8R332 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nup58Q8R332 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.23■□□□□ 0.67
Nup58Q8R332 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup58Q8R332 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.23■□□□□ 0.67
Nup58Q8R332 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup58Q8R332 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.23■□□□□ 0.67
Nup58Q8R332 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nup58Q8R332 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nup58Q8R332 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nup58Q8R332 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nup58Q8R332 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.22■□□□□ 0.67
Nup58Q8R332 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nup58Q8R332 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.22■□□□□ 0.67
Nup58Q8R332 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup58Q8R332 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nup58Q8R332 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nup58Q8R332 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms