Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn1Q8K445 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn1Q8K445 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn1Q8K445 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn1Q8K445 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17■□□□□ 0.31
Clrn1Q8K445 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn1Q8K445 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn1Q8K445 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn1Q8K445 Fst-202ENSMUST00000223640 2612 ntBASIC16.99■□□□□ 0.31
Clrn1Q8K445 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn1Q8K445 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn1Q8K445 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn1Q8K445 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn1Q8K445 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.99■□□□□ 0.31
Clrn1Q8K445 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn1Q8K445 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn1Q8K445 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn1Q8K445 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.99■□□□□ 0.31
Clrn1Q8K445 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn1Q8K445 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn1Q8K445 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.98■□□□□ 0.31
Clrn1Q8K445 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.98■□□□□ 0.31
Clrn1Q8K445 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn1Q8K445 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn1Q8K445 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.98■□□□□ 0.31
Clrn1Q8K445 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.98■□□□□ 0.31
Clrn1Q8K445 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.98■□□□□ 0.31
Clrn1Q8K445 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Clrn1Q8K445 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Gm44549-201ENSMUST00000208351 577 ntBASIC16.97■□□□□ 0.31
Clrn1Q8K445 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.97■□□□□ 0.31
Clrn1Q8K445 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn1Q8K445 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn1Q8K445 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn1Q8K445 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Clrn1Q8K445 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn1Q8K445 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn1Q8K445 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn1Q8K445 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Clrn1Q8K445 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.96■□□□□ 0.31
Clrn1Q8K445 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn1Q8K445 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn1Q8K445 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn1Q8K445 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn1Q8K445 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn1Q8K445 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clrn1Q8K445 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.96■□□□□ 0.3
Clrn1Q8K445 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn1Q8K445 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clrn1Q8K445 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.95■□□□□ 0.3
Clrn1Q8K445 Gm2399-201ENSMUST00000104944 225 ntBASIC16.95■□□□□ 0.3
Clrn1Q8K445 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn1Q8K445 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn1Q8K445 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms