Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Vps50Q8CI71 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps50Q8CI71 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps50Q8CI71 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps50Q8CI71 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.67■□□□□ 0.42
Vps50Q8CI71 Gm7860-201ENSMUST00000121190 879 ntBASIC17.67■□□□□ 0.42
Vps50Q8CI71 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps50Q8CI71 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.67■□□□□ 0.42
Vps50Q8CI71 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps50Q8CI71 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps50Q8CI71 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Vps50Q8CI71 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
Vps50Q8CI71 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps50Q8CI71 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps50Q8CI71 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vps50Q8CI71 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps50Q8CI71 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vps50Q8CI71 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps50Q8CI71 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps50Q8CI71 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps50Q8CI71 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps50Q8CI71 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps50Q8CI71 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps50Q8CI71 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps50Q8CI71 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.65■□□□□ 0.42
Vps50Q8CI71 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Gm13534-201ENSMUST00000121169 513 ntBASIC17.65■□□□□ 0.42
Vps50Q8CI71 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.65■□□□□ 0.42
Vps50Q8CI71 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.65■□□□□ 0.42
Vps50Q8CI71 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps50Q8CI71 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.65■□□□□ 0.42
Vps50Q8CI71 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vps50Q8CI71 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vps50Q8CI71 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps50Q8CI71 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.64■□□□□ 0.41
Vps50Q8CI71 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps50Q8CI71 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Vps50Q8CI71 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps50Q8CI71 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps50Q8CI71 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps50Q8CI71 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps50Q8CI71 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Vps50Q8CI71 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps50Q8CI71 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps50Q8CI71 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps50Q8CI71 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Vps50Q8CI71 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vps50Q8CI71 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Vps50Q8CI71 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps50Q8CI71 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Vps50Q8CI71 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps50Q8CI71 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps50Q8CI71 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.62■□□□□ 0.41
Vps50Q8CI71 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.62■□□□□ 0.41
Vps50Q8CI71 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps50Q8CI71 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.62■□□□□ 0.41
Vps50Q8CI71 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps50Q8CI71 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps50Q8CI71 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Gm6365-201ENSMUST00000054711 744 ntBASIC17.61■□□□□ 0.41
Vps50Q8CI71 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps50Q8CI71 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps50Q8CI71 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms