Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rbm28Q8CGC6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rbm28Q8CGC6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.29■■□□□ 1
Rbm28Q8CGC6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rbm28Q8CGC6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rbm28Q8CGC6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.29■■□□□ 1
Rbm28Q8CGC6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Rbm28Q8CGC6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rbm28Q8CGC6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rbm28Q8CGC6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rbm28Q8CGC6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Rbm28Q8CGC6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rbm28Q8CGC6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Gm715-201ENSMUST00000117865 831 ntBASIC21.28■■□□□ 1
Rbm28Q8CGC6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.28■■□□□ 1
Rbm28Q8CGC6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rbm28Q8CGC6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rbm28Q8CGC6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rbm28Q8CGC6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rbm28Q8CGC6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rbm28Q8CGC6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.27■■□□□ 1
Rbm28Q8CGC6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rbm28Q8CGC6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Rbm28Q8CGC6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rbm28Q8CGC6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rbm28Q8CGC6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rbm28Q8CGC6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rbm28Q8CGC6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rbm28Q8CGC6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Rbm28Q8CGC6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rbm28Q8CGC6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rbm28Q8CGC6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Zfp783-201ENSMUST00000095946 670 ntBASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rbm28Q8CGC6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rbm28Q8CGC6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rbm28Q8CGC6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rbm28Q8CGC6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rbm28Q8CGC6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.25■□□□□ 0.99
Rbm28Q8CGC6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rbm28Q8CGC6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rbm28Q8CGC6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rbm28Q8CGC6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Mir1199-201ENSMUST00000117015 119 ntBASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rbm28Q8CGC6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rbm28Q8CGC6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.22■□□□□ 0.99
Rbm28Q8CGC6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms