Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Snx30Q8CE50 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Snx30Q8CE50 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Snx30Q8CE50 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snx30Q8CE50 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snx30Q8CE50 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Snx30Q8CE50 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snx30Q8CE50 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snx30Q8CE50 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Snx30Q8CE50 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snx30Q8CE50 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snx30Q8CE50 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snx30Q8CE50 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snx30Q8CE50 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.55■□□□□ 0.56
Snx30Q8CE50 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Snx30Q8CE50 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Snx30Q8CE50 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snx30Q8CE50 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snx30Q8CE50 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Snx30Q8CE50 Gm22325-201ENSMUST00000158904 308 ntBASIC18.53■□□□□ 0.56
Snx30Q8CE50 Gm26524-201ENSMUST00000192339 390 ntBASIC18.53■□□□□ 0.56
Snx30Q8CE50 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snx30Q8CE50 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snx30Q8CE50 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snx30Q8CE50 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snx30Q8CE50 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Snx30Q8CE50 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Snx30Q8CE50 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx30Q8CE50 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx30Q8CE50 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.52■□□□□ 0.56
Snx30Q8CE50 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx30Q8CE50 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx30Q8CE50 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Snx30Q8CE50 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx30Q8CE50 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx30Q8CE50 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Snx30Q8CE50 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Snx30Q8CE50 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.51■□□□□ 0.55
Snx30Q8CE50 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.51■□□□□ 0.55
Snx30Q8CE50 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Snx30Q8CE50 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx30Q8CE50 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.51■□□□□ 0.55
Snx30Q8CE50 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.51■□□□□ 0.55
Snx30Q8CE50 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Gm5408-201ENSMUST00000197998 747 ntBASIC18.5■□□□□ 0.55
Snx30Q8CE50 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snx30Q8CE50 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx30Q8CE50 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms