Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Gm7977-201ENSMUST00000193787 748 ntBASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Timm23-208ENSMUST00000226683 750 ntBASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rsph6aQ8CDR2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Rsph6aQ8CDR2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Gm11643-201ENSMUST00000119578 864 ntBASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Gm9987-201ENSMUST00000069768 567 ntBASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rsph6aQ8CDR2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rsph6aQ8CDR2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rsph6aQ8CDR2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rsph6aQ8CDR2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rsph6aQ8CDR2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rsph6aQ8CDR2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rsph6aQ8CDR2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Rsph6aQ8CDR2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rsph6aQ8CDR2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Rsph6aQ8CDR2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Rsph6aQ8CDR2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rsph6aQ8CDR2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rsph6aQ8CDR2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Rsph6aQ8CDR2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rsph6aQ8CDR2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rsph6aQ8CDR2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC23.49■■□□□ 1.35
Rsph6aQ8CDR2 Gm30025-201ENSMUST00000218555 728 ntBASIC23.49■■□□□ 1.35
Rsph6aQ8CDR2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rsph6aQ8CDR2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rsph6aQ8CDR2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rsph6aQ8CDR2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC23.48■■□□□ 1.35
Rsph6aQ8CDR2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rsph6aQ8CDR2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rsph6aQ8CDR2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC23.48■■□□□ 1.35
Rsph6aQ8CDR2 Gm6627-201ENSMUST00000218299 2386 ntBASIC23.48■■□□□ 1.35
Rsph6aQ8CDR2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Gm6433-201ENSMUST00000118634 875 ntBASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rsph6aQ8CDR2 Gm8668-201ENSMUST00000120559 1447 ntBASIC23.46■■□□□ 1.35
Rsph6aQ8CDR2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
Rsph6aQ8CDR2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
Rsph6aQ8CDR2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC23.46■■□□□ 1.35
Rsph6aQ8CDR2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rsph6aQ8CDR2 Gm37820-201ENSMUST00000194021 2147 ntBASIC23.46■■□□□ 1.35
Rsph6aQ8CDR2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rsph6aQ8CDR2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rsph6aQ8CDR2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rsph6aQ8CDR2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rsph6aQ8CDR2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Rsph6aQ8CDR2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Rsph6aQ8CDR2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
Rsph6aQ8CDR2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Rsph6aQ8CDR2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC23.45■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms