Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
SynpoQ8CC35 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SynpoQ8CC35 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
SynpoQ8CC35 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SynpoQ8CC35 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SynpoQ8CC35 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SynpoQ8CC35 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SynpoQ8CC35 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SynpoQ8CC35 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.39■□□□□ 0.37
SynpoQ8CC35 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SynpoQ8CC35 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SynpoQ8CC35 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SynpoQ8CC35 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.39■□□□□ 0.37
SynpoQ8CC35 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SynpoQ8CC35 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SynpoQ8CC35 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SynpoQ8CC35 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
SynpoQ8CC35 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Gm37856-201ENSMUST00000191634 999 ntBASIC17.38■□□□□ 0.37
SynpoQ8CC35 Trmt13-210ENSMUST00000198454 880 ntBASIC17.38■□□□□ 0.37
SynpoQ8CC35 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SynpoQ8CC35 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SynpoQ8CC35 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.37■□□□□ 0.37
SynpoQ8CC35 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.37■□□□□ 0.37
SynpoQ8CC35 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SynpoQ8CC35 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SynpoQ8CC35 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SynpoQ8CC35 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.35■□□□□ 0.37
SynpoQ8CC35 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.35■□□□□ 0.37
SynpoQ8CC35 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms