Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 Mir5130-201ENSMUST00000175160 84 ntBASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 Gm38027-201ENSMUST00000192315 235 ntBASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap54Q8C6S9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Cfap54Q8C6S9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap54Q8C6S9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap54Q8C6S9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap54Q8C6S9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 Gm38285-201ENSMUST00000192928 922 ntBASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap54Q8C6S9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap54Q8C6S9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap54Q8C6S9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap54Q8C6S9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap54Q8C6S9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap54Q8C6S9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap54Q8C6S9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap54Q8C6S9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap54Q8C6S9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cfap54Q8C6S9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap54Q8C6S9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.31■□□□□ 0.36
Cfap54Q8C6S9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap54Q8C6S9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Cfap54Q8C6S9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Gm27704-201ENSMUST00000185094 107 ntBASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Gm17807-201ENSMUST00000186869 298 ntBASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cfap54Q8C6S9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms