Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trim47Q8C0E3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim47Q8C0E3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim47Q8C0E3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim47Q8C0E3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim47Q8C0E3 Gm42545-201ENSMUST00000202755 922 ntBASIC19.93■□□□□ 0.78
Trim47Q8C0E3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trim47Q8C0E3 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.93■□□□□ 0.78
Trim47Q8C0E3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim47Q8C0E3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Trim47Q8C0E3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.92■□□□□ 0.78
Trim47Q8C0E3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Trim47Q8C0E3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim47Q8C0E3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim47Q8C0E3 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.92■□□□□ 0.78
Trim47Q8C0E3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.92■□□□□ 0.78
Trim47Q8C0E3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Trim47Q8C0E3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.92■□□□□ 0.78
Trim47Q8C0E3 Gm18025-201ENSMUST00000221733 862 ntBASIC19.92■□□□□ 0.78
Trim47Q8C0E3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim47Q8C0E3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim47Q8C0E3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim47Q8C0E3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim47Q8C0E3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim47Q8C0E3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim47Q8C0E3 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.91■□□□□ 0.78
Trim47Q8C0E3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim47Q8C0E3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim47Q8C0E3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim47Q8C0E3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim47Q8C0E3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim47Q8C0E3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.91■□□□□ 0.78
Trim47Q8C0E3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim47Q8C0E3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trim47Q8C0E3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim47Q8C0E3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Trim47Q8C0E3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.9■□□□□ 0.78
Trim47Q8C0E3 Gm43183-201ENSMUST00000200632 547 ntBASIC19.9■□□□□ 0.78
Trim47Q8C0E3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.9■□□□□ 0.78
Trim47Q8C0E3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim47Q8C0E3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim47Q8C0E3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim47Q8C0E3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim47Q8C0E3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim47Q8C0E3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim47Q8C0E3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim47Q8C0E3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim47Q8C0E3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim47Q8C0E3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Trim47Q8C0E3 Mir2861-201ENSMUST00000175539 82 ntBASIC19.89■□□□□ 0.77
Trim47Q8C0E3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim47Q8C0E3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim47Q8C0E3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim47Q8C0E3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim47Q8C0E3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim47Q8C0E3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trim47Q8C0E3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Mir6349-201ENSMUST00000184059 97 ntBASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim47Q8C0E3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim47Q8C0E3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim47Q8C0E3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim47Q8C0E3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trim47Q8C0E3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Trim47Q8C0E3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim47Q8C0E3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim47Q8C0E3 Gm37292-201ENSMUST00000192062 758 ntBASIC19.87■□□□□ 0.77
Trim47Q8C0E3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.87■□□□□ 0.77
Trim47Q8C0E3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim47Q8C0E3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms