Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Gm38285-201ENSMUST00000192928 922 ntBASIC18.57■□□□□ 0.56
Trub1Q8C0D0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.57■□□□□ 0.56
Trub1Q8C0D0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.57■□□□□ 0.56
Trub1Q8C0D0 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trub1Q8C0D0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Gm5408-201ENSMUST00000197998 747 ntBASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trub1Q8C0D0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trub1Q8C0D0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.55■□□□□ 0.56
Trub1Q8C0D0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trub1Q8C0D0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trub1Q8C0D0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trub1Q8C0D0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.55■□□□□ 0.56
Trub1Q8C0D0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.55■□□□□ 0.56
Trub1Q8C0D0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trub1Q8C0D0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.54■□□□□ 0.56
Trub1Q8C0D0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Zfp783-201ENSMUST00000095946 670 ntBASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Gm10602-201ENSMUST00000098239 609 ntBASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trub1Q8C0D0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trub1Q8C0D0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trub1Q8C0D0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.52■□□□□ 0.56
Trub1Q8C0D0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trub1Q8C0D0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trub1Q8C0D0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trub1Q8C0D0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Trub1Q8C0D0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.52■□□□□ 0.56
Trub1Q8C0D0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.52■□□□□ 0.56
Trub1Q8C0D0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trub1Q8C0D0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trub1Q8C0D0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trub1Q8C0D0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Trub1Q8C0D0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.52■□□□□ 0.55
Trub1Q8C0D0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.52■□□□□ 0.55
Trub1Q8C0D0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trub1Q8C0D0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.51■□□□□ 0.55
Trub1Q8C0D0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms