Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.26■□□□□ 0.51
Sh3rf2Q8BZT2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf2Q8BZT2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf2Q8BZT2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf2Q8BZT2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf2Q8BZT2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.25■□□□□ 0.51
Sh3rf2Q8BZT2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.25■□□□□ 0.51
Sh3rf2Q8BZT2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf2Q8BZT2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.25■□□□□ 0.51
Sh3rf2Q8BZT2 Mir2861-201ENSMUST00000175539 82 ntBASIC18.25■□□□□ 0.51
Sh3rf2Q8BZT2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf2Q8BZT2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3rf2Q8BZT2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sh3rf2Q8BZT2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Sh3rf2Q8BZT2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.23■□□□□ 0.51
Sh3rf2Q8BZT2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 Golph3-205ENSMUST00000228671 2842 ntBASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 Gm21814-202ENSMUST00000203277 873 ntBASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3rf2Q8BZT2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3rf2Q8BZT2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3rf2Q8BZT2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.21■□□□□ 0.51
Sh3rf2Q8BZT2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3rf2Q8BZT2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.21■□□□□ 0.51
Sh3rf2Q8BZT2 Gm7977-201ENSMUST00000193787 748 ntBASIC18.21■□□□□ 0.51
Sh3rf2Q8BZT2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.21■□□□□ 0.51
Sh3rf2Q8BZT2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3rf2Q8BZT2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms