Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trerf1Q8BXJ2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trerf1Q8BXJ2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trerf1Q8BXJ2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Trerf1Q8BXJ2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trerf1Q8BXJ2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trerf1Q8BXJ2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trerf1Q8BXJ2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Trerf1Q8BXJ2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trerf1Q8BXJ2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trerf1Q8BXJ2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trerf1Q8BXJ2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trerf1Q8BXJ2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trerf1Q8BXJ2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trerf1Q8BXJ2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Trerf1Q8BXJ2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trerf1Q8BXJ2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trerf1Q8BXJ2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.89■□□□□ 0.61
Trerf1Q8BXJ2 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.89■□□□□ 0.61
Trerf1Q8BXJ2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.89■□□□□ 0.61
Trerf1Q8BXJ2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trerf1Q8BXJ2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trerf1Q8BXJ2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.89■□□□□ 0.61
Trerf1Q8BXJ2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.89■□□□□ 0.61
Trerf1Q8BXJ2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.89■□□□□ 0.61
Trerf1Q8BXJ2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trerf1Q8BXJ2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trerf1Q8BXJ2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trerf1Q8BXJ2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.89■□□□□ 0.61
Trerf1Q8BXJ2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trerf1Q8BXJ2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trerf1Q8BXJ2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trerf1Q8BXJ2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms