Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Lsm11Q8BUV6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Gm13241-201ENSMUST00000094493 780 ntBASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Lsm11Q8BUV6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm11Q8BUV6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm11Q8BUV6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm11Q8BUV6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm11Q8BUV6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms