Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col16a1Q8BLX7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col16a1Q8BLX7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Col16a1Q8BLX7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col16a1Q8BLX7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col16a1Q8BLX7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col16a1Q8BLX7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Col16a1Q8BLX7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Col16a1Q8BLX7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col16a1Q8BLX7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col16a1Q8BLX7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col16a1Q8BLX7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col16a1Q8BLX7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col16a1Q8BLX7 Gm16061-201ENSMUST00000122167 857 ntBASIC23.81■■□□□ 1.4
Col16a1Q8BLX7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col16a1Q8BLX7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Col16a1Q8BLX7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col16a1Q8BLX7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Col16a1Q8BLX7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col16a1Q8BLX7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC23.8■■□□□ 1.4
Col16a1Q8BLX7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col16a1Q8BLX7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Col16a1Q8BLX7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col16a1Q8BLX7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col16a1Q8BLX7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col16a1Q8BLX7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Col16a1Q8BLX7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col16a1Q8BLX7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col16a1Q8BLX7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Col16a1Q8BLX7 Gm8258-201ENSMUST00000055593 1449 ntBASIC23.79■■□□□ 1.4
Col16a1Q8BLX7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Gm28033-201ENSMUST00000184224 96 ntBASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Tgds-204ENSMUST00000228543 1594 ntBASIC23.78■■□□□ 1.4
Col16a1Q8BLX7 Gm43545-201ENSMUST00000196765 2779 ntBASIC23.77■■□□□ 1.4
Col16a1Q8BLX7 Gm37820-201ENSMUST00000194021 2147 ntBASIC23.77■■□□□ 1.4
Col16a1Q8BLX7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col16a1Q8BLX7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC23.77■■□□□ 1.4
Col16a1Q8BLX7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC23.77■■□□□ 1.4
Col16a1Q8BLX7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC23.77■■□□□ 1.4
Col16a1Q8BLX7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC23.77■■□□□ 1.4
Col16a1Q8BLX7 Gm7370-201ENSMUST00000219471 767 ntBASIC23.77■■□□□ 1.4
Col16a1Q8BLX7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col16a1Q8BLX7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col16a1Q8BLX7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col16a1Q8BLX7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Col16a1Q8BLX7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC23.76■■□□□ 1.39
Col16a1Q8BLX7 Gm43213-201ENSMUST00000151866 1790 ntBASIC23.76■■□□□ 1.39
Col16a1Q8BLX7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC23.76■■□□□ 1.39
Col16a1Q8BLX7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC23.76■■□□□ 1.39
Col16a1Q8BLX7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC23.76■■□□□ 1.39
Col16a1Q8BLX7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col16a1Q8BLX7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col16a1Q8BLX7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col16a1Q8BLX7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col16a1Q8BLX7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Col16a1Q8BLX7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col16a1Q8BLX7 Gm25016-201ENSMUST00000158399 131 ntBASIC23.75■■□□□ 1.39
Col16a1Q8BLX7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Col16a1Q8BLX7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Col16a1Q8BLX7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col16a1Q8BLX7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
Col16a1Q8BLX7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
Col16a1Q8BLX7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col16a1Q8BLX7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC23.74■■□□□ 1.39
Col16a1Q8BLX7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Col16a1Q8BLX7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Col16a1Q8BLX7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col16a1Q8BLX7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col16a1Q8BLX7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col16a1Q8BLX7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col16a1Q8BLX7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col16a1Q8BLX7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col16a1Q8BLX7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col16a1Q8BLX7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col16a1Q8BLX7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col16a1Q8BLX7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC23.73■■□□□ 1.39
Col16a1Q8BLX7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col16a1Q8BLX7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col16a1Q8BLX7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC23.72■■□□□ 1.39
Col16a1Q8BLX7 Gm10418-201ENSMUST00000100943 576 ntBASIC23.72■■□□□ 1.39
Col16a1Q8BLX7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col16a1Q8BLX7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col16a1Q8BLX7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC23.72■■□□□ 1.39
Col16a1Q8BLX7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col16a1Q8BLX7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col16a1Q8BLX7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col16a1Q8BLX7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
Col16a1Q8BLX7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms