Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop53Q8BK35 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop53Q8BK35 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.3■□□□□ 0.68
Nop53Q8BK35 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nop53Q8BK35 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.3■□□□□ 0.68
Nop53Q8BK35 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nop53Q8BK35 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop53Q8BK35 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop53Q8BK35 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop53Q8BK35 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop53Q8BK35 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nop53Q8BK35 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop53Q8BK35 Fst-202ENSMUST00000223640 2612 ntBASIC19.3■□□□□ 0.68
Nop53Q8BK35 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop53Q8BK35 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop53Q8BK35 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.29■□□□□ 0.68
Nop53Q8BK35 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.29■□□□□ 0.68
Nop53Q8BK35 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nop53Q8BK35 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Gm42778-201ENSMUST00000199644 553 ntBASIC19.29■□□□□ 0.68
Nop53Q8BK35 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop53Q8BK35 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Gm13234-201ENSMUST00000120010 747 ntBASIC19.28■□□□□ 0.68
Nop53Q8BK35 Gm13534-201ENSMUST00000121169 513 ntBASIC19.28■□□□□ 0.68
Nop53Q8BK35 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop53Q8BK35 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nop53Q8BK35 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nop53Q8BK35 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nop53Q8BK35 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nop53Q8BK35 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nop53Q8BK35 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.27■□□□□ 0.68
Nop53Q8BK35 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nop53Q8BK35 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.27■□□□□ 0.68
Nop53Q8BK35 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.27■□□□□ 0.68
Nop53Q8BK35 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nop53Q8BK35 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nop53Q8BK35 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nop53Q8BK35 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nop53Q8BK35 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nop53Q8BK35 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nop53Q8BK35 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nop53Q8BK35 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nop53Q8BK35 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nop53Q8BK35 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nop53Q8BK35 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nop53Q8BK35 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nop53Q8BK35 Gm29257-201ENSMUST00000186115 639 ntBASIC19.26■□□□□ 0.67
Nop53Q8BK35 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nop53Q8BK35 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nop53Q8BK35 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nop53Q8BK35 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nop53Q8BK35 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nop53Q8BK35 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.26■□□□□ 0.67
Nop53Q8BK35 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nop53Q8BK35 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop53Q8BK35 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Nop53Q8BK35 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop53Q8BK35 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.25■□□□□ 0.67
Nop53Q8BK35 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop53Q8BK35 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Nop53Q8BK35 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.25■□□□□ 0.67
Nop53Q8BK35 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop53Q8BK35 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop53Q8BK35 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop53Q8BK35 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop53Q8BK35 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop53Q8BK35 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nop53Q8BK35 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop53Q8BK35 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop53Q8BK35 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nop53Q8BK35 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nop53Q8BK35 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop53Q8BK35 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop53Q8BK35 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nop53Q8BK35 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nop53Q8BK35 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms