Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chmp2bQ8BJF9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.41■□□□□ 0.54
Chmp2bQ8BJF9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2bQ8BJF9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2bQ8BJF9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.41■□□□□ 0.54
Chmp2bQ8BJF9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Chmp2bQ8BJF9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.41■□□□□ 0.54
Chmp2bQ8BJF9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2bQ8BJF9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.41■□□□□ 0.54
Chmp2bQ8BJF9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2bQ8BJF9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2bQ8BJF9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chmp2bQ8BJF9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2bQ8BJF9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.39■□□□□ 0.54
Chmp2bQ8BJF9 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.39■□□□□ 0.54
Chmp2bQ8BJF9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Chmp2bQ8BJF9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.39■□□□□ 0.53
Chmp2bQ8BJF9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2bQ8BJF9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.39■□□□□ 0.53
Chmp2bQ8BJF9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2bQ8BJF9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2bQ8BJF9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Chmp2bQ8BJF9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2bQ8BJF9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.39■□□□□ 0.53
Chmp2bQ8BJF9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Chmp2bQ8BJF9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.39■□□□□ 0.53
Chmp2bQ8BJF9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2bQ8BJF9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2bQ8BJF9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2bQ8BJF9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms