Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn3Q8BHH8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn3Q8BHH8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn3Q8BHH8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Clrn3Q8BHH8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Clrn3Q8BHH8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clrn3Q8BHH8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Clrn3Q8BHH8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.83■□□□□ 0.28
Clrn3Q8BHH8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clrn3Q8BHH8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.83■□□□□ 0.28
Clrn3Q8BHH8 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.83■□□□□ 0.28
Clrn3Q8BHH8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clrn3Q8BHH8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clrn3Q8BHH8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.83■□□□□ 0.28
Clrn3Q8BHH8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clrn3Q8BHH8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clrn3Q8BHH8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clrn3Q8BHH8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms