Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim23Q8BGX0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim23Q8BGX0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim23Q8BGX0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim23Q8BGX0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim23Q8BGX0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim23Q8BGX0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim23Q8BGX0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim23Q8BGX0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim23Q8BGX0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim23Q8BGX0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim23Q8BGX0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim23Q8BGX0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim23Q8BGX0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim23Q8BGX0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim23Q8BGX0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim23Q8BGX0 Mir6349-201ENSMUST00000184059 97 ntBASIC17.33■□□□□ 0.36
Trim23Q8BGX0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim23Q8BGX0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim23Q8BGX0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim23Q8BGX0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim23Q8BGX0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim23Q8BGX0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim23Q8BGX0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim23Q8BGX0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim23Q8BGX0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim23Q8BGX0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.32■□□□□ 0.36
Trim23Q8BGX0 Gm10698-201ENSMUST00000182663 604 ntBASIC17.32■□□□□ 0.36
Trim23Q8BGX0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim23Q8BGX0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim23Q8BGX0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim23Q8BGX0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim23Q8BGX0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Trim23Q8BGX0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Trim23Q8BGX0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Gm15375-201ENSMUST00000119510 849 ntBASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim23Q8BGX0 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Gm15378-201ENSMUST00000121894 207 ntBASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim23Q8BGX0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Mir2861-201ENSMUST00000175539 82 ntBASIC17.29■□□□□ 0.36
Trim23Q8BGX0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.29■□□□□ 0.36
Trim23Q8BGX0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms