Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smndc1Q8BGT7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smndc1Q8BGT7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smndc1Q8BGT7 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.46■□□□□ 0.39
Smndc1Q8BGT7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.46■□□□□ 0.38
Smndc1Q8BGT7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smndc1Q8BGT7 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.46■□□□□ 0.38
Smndc1Q8BGT7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smndc1Q8BGT7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Gm5874-201ENSMUST00000096101 508 ntBASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smndc1Q8BGT7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Smad6-203ENSMUST00000179458 273 ntBASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smndc1Q8BGT7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Smndc1Q8BGT7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.42■□□□□ 0.38
Smndc1Q8BGT7 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smndc1Q8BGT7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Dancr-204ENSMUST00000132389 2347 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms