Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Samm50Q8BGH2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Samm50Q8BGH2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Samm50Q8BGH2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Samm50Q8BGH2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Samm50Q8BGH2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21.06■□□□□ 0.96
Samm50Q8BGH2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Samm50Q8BGH2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Samm50Q8BGH2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Samm50Q8BGH2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Samm50Q8BGH2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Samm50Q8BGH2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Samm50Q8BGH2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Samm50Q8BGH2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Samm50Q8BGH2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Samm50Q8BGH2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Samm50Q8BGH2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Samm50Q8BGH2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.01■□□□□ 0.95
Samm50Q8BGH2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Samm50Q8BGH2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Samm50Q8BGH2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Samm50Q8BGH2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms