Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim65Q8BFW4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim65Q8BFW4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trim65Q8BFW4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
Trim65Q8BFW4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim65Q8BFW4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim65Q8BFW4 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.31■□□□□ 0.68
Trim65Q8BFW4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim65Q8BFW4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Gm2399-201ENSMUST00000104944 225 ntBASIC19.29■□□□□ 0.68
Trim65Q8BFW4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.29■□□□□ 0.68
Trim65Q8BFW4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.29■□□□□ 0.68
Trim65Q8BFW4 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim65Q8BFW4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim65Q8BFW4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.27■□□□□ 0.68
Trim65Q8BFW4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim65Q8BFW4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Trim65Q8BFW4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim65Q8BFW4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim65Q8BFW4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Gm29257-201ENSMUST00000186115 639 ntBASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim65Q8BFW4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim65Q8BFW4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms