Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.27■□□□□ 0.68
Nucks1Q80XU3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nucks1Q80XU3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nucks1Q80XU3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nucks1Q80XU3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Nucks1Q80XU3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nucks1Q80XU3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nucks1Q80XU3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nucks1Q80XU3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nucks1Q80XU3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nucks1Q80XU3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nucks1Q80XU3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.26■□□□□ 0.67
Nucks1Q80XU3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.26■□□□□ 0.67
Nucks1Q80XU3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
Nucks1Q80XU3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nucks1Q80XU3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nucks1Q80XU3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nucks1Q80XU3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nucks1Q80XU3 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.25■□□□□ 0.67
Nucks1Q80XU3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nucks1Q80XU3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nucks1Q80XU3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.25■□□□□ 0.67
Nucks1Q80XU3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nucks1Q80XU3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.25■□□□□ 0.67
Nucks1Q80XU3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.25■□□□□ 0.67
Nucks1Q80XU3 AV356131-201ENSMUST00000206201 750 ntBASIC19.25■□□□□ 0.67
Nucks1Q80XU3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nucks1Q80XU3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nucks1Q80XU3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nucks1Q80XU3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nucks1Q80XU3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nucks1Q80XU3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.22■□□□□ 0.67
Nucks1Q80XU3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nucks1Q80XU3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nucks1Q80XU3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nucks1Q80XU3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nucks1Q80XU3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nucks1Q80XU3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nucks1Q80XU3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.21■□□□□ 0.67
Nucks1Q80XU3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nucks1Q80XU3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nucks1Q80XU3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nucks1Q80XU3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms