Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.74■□□□□ 0.91
Prpf40bQ80W14 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.74■□□□□ 0.91
Prpf40bQ80W14 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf40bQ80W14 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf40bQ80W14 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Prpf40bQ80W14 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Prpf40bQ80W14 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf40bQ80W14 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Prpf40bQ80W14 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf40bQ80W14 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf40bQ80W14 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf40bQ80W14 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf40bQ80W14 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf40bQ80W14 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf40bQ80W14 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Prpf40bQ80W14 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf40bQ80W14 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf40bQ80W14 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf40bQ80W14 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.71■□□□□ 0.91
Prpf40bQ80W14 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf40bQ80W14 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf40bQ80W14 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf40bQ80W14 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf40bQ80W14 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf40bQ80W14 Gm10517-202ENSMUST00000192970 758 ntBASIC20.71■□□□□ 0.91
Prpf40bQ80W14 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf40bQ80W14 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.71■□□□□ 0.91
Prpf40bQ80W14 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.71■□□□□ 0.91
Prpf40bQ80W14 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.71■□□□□ 0.91
Prpf40bQ80W14 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.71■□□□□ 0.91
Prpf40bQ80W14 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf40bQ80W14 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf40bQ80W14 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Prpf40bQ80W14 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Prpf40bQ80W14 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf40bQ80W14 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf40bQ80W14 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf40bQ80W14 Gm13559-201ENSMUST00000120476 863 ntBASIC20.7■□□□□ 0.9
Prpf40bQ80W14 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf40bQ80W14 Gm21814-202ENSMUST00000203277 873 ntBASIC20.7■□□□□ 0.9
Prpf40bQ80W14 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Prpf40bQ80W14 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf40bQ80W14 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf40bQ80W14 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf40bQ80W14 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf40bQ80W14 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf40bQ80W14 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf40bQ80W14 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Gm11539-201ENSMUST00000119837 557 ntBASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Gm13436-201ENSMUST00000120418 567 ntBASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Prpf40bQ80W14 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms