Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm38285-201ENSMUST00000192928 922 ntBASIC16.57■□□□□ 0.24
Pif1Q80SX8 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.57■□□□□ 0.24
Pif1Q80SX8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pif1Q80SX8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pif1Q80SX8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pif1Q80SX8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pif1Q80SX8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.57■□□□□ 0.24
Pif1Q80SX8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Gm10231-201ENSMUST00000181584 441 ntBASIC16.56■□□□□ 0.24
Pif1Q80SX8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.56■□□□□ 0.24
Pif1Q80SX8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Gm10175-202ENSMUST00000208752 441 ntBASIC16.56■□□□□ 0.24
Pif1Q80SX8 Gm30025-201ENSMUST00000218555 728 ntBASIC16.56■□□□□ 0.24
Pif1Q80SX8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pif1Q80SX8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.55■□□□□ 0.24
Pif1Q80SX8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Gm21814-202ENSMUST00000203277 873 ntBASIC16.55■□□□□ 0.24
Pif1Q80SX8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.55■□□□□ 0.24
Pif1Q80SX8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pif1Q80SX8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pif1Q80SX8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pif1Q80SX8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pif1Q80SX8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pif1Q80SX8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pif1Q80SX8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pif1Q80SX8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pif1Q80SX8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pif1Q80SX8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pif1Q80SX8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pif1Q80SX8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pif1Q80SX8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pif1Q80SX8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.53■□□□□ 0.24
Pif1Q80SX8 Gm37292-201ENSMUST00000192062 758 ntBASIC16.53■□□□□ 0.24
Pif1Q80SX8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pif1Q80SX8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.53■□□□□ 0.24
Pif1Q80SX8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.53■□□□□ 0.24
Pif1Q80SX8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pif1Q80SX8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pif1Q80SX8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pif1Q80SX8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pif1Q80SX8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pif1Q80SX8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pif1Q80SX8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pif1Q80SX8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.52■□□□□ 0.24
Pif1Q80SX8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pif1Q80SX8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pif1Q80SX8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Pif1Q80SX8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pif1Q80SX8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pif1Q80SX8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.52■□□□□ 0.23
Pif1Q80SX8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pif1Q80SX8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pif1Q80SX8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
Pif1Q80SX8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pif1Q80SX8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pif1Q80SX8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pif1Q80SX8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pif1Q80SX8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms