Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubfd1Q78JW9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubfd1Q78JW9 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.52■□□□□ 0.4
Ubfd1Q78JW9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Ubfd1Q78JW9 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.52■□□□□ 0.39
Ubfd1Q78JW9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ubfd1Q78JW9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Ubfd1Q78JW9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Mir5122-201ENSMUST00000175004 89 ntBASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Gm37055-201ENSMUST00000191866 133 ntBASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubfd1Q78JW9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 Mir7071-201ENSMUST00000184847 69 ntBASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubfd1Q78JW9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubfd1Q78JW9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ubfd1Q78JW9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Ubfd1Q78JW9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.47■□□□□ 0.39
Ubfd1Q78JW9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.47■□□□□ 0.39
Ubfd1Q78JW9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubfd1Q78JW9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ubfd1Q78JW9 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.47■□□□□ 0.39
Ubfd1Q78JW9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubfd1Q78JW9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubfd1Q78JW9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubfd1Q78JW9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms