Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc44a1Q6X893 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc44a1Q6X893 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Slc44a1Q6X893 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc44a1Q6X893 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc44a1Q6X893 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Slc44a1Q6X893 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc44a1Q6X893 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.89■□□□□ 0.93
Slc44a1Q6X893 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc44a1Q6X893 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.89■□□□□ 0.93
Slc44a1Q6X893 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.89■□□□□ 0.93
Slc44a1Q6X893 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.89■□□□□ 0.93
Slc44a1Q6X893 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc44a1Q6X893 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.89■□□□□ 0.93
Slc44a1Q6X893 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc44a1Q6X893 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.89■□□□□ 0.93
Slc44a1Q6X893 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc44a1Q6X893 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc44a1Q6X893 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc44a1Q6X893 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc44a1Q6X893 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slc44a1Q6X893 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc44a1Q6X893 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.86■□□□□ 0.93
Slc44a1Q6X893 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.86■□□□□ 0.93
Slc44a1Q6X893 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.86■□□□□ 0.93
Slc44a1Q6X893 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.86■□□□□ 0.93
Slc44a1Q6X893 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc44a1Q6X893 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Slc44a1Q6X893 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc44a1Q6X893 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc44a1Q6X893 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc44a1Q6X893 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc44a1Q6X893 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc44a1Q6X893 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc44a1Q6X893 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc44a1Q6X893 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Slc44a1Q6X893 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc44a1Q6X893 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc44a1Q6X893 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slc44a1Q6X893 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc44a1Q6X893 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc44a1Q6X893 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc44a1Q6X893 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc44a1Q6X893 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc44a1Q6X893 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc44a1Q6X893 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Slc44a1Q6X893 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc44a1Q6X893 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
Slc44a1Q6X893 Gm10698-201ENSMUST00000182663 604 ntBASIC20.84■□□□□ 0.93
Slc44a1Q6X893 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Slc44a1Q6X893 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc44a1Q6X893 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc44a1Q6X893 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.84■□□□□ 0.93
Slc44a1Q6X893 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc44a1Q6X893 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc44a1Q6X893 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Slc44a1Q6X893 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc44a1Q6X893 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc44a1Q6X893 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc44a1Q6X893 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc44a1Q6X893 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slc44a1Q6X893 Gm18025-201ENSMUST00000221733 862 ntBASIC20.83■□□□□ 0.93
Slc44a1Q6X893 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc44a1Q6X893 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Slc44a1Q6X893 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Slc44a1Q6X893 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc44a1Q6X893 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Slc44a1Q6X893 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc44a1Q6X893 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc44a1Q6X893 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc44a1Q6X893 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc44a1Q6X893 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.82■□□□□ 0.92
Slc44a1Q6X893 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc44a1Q6X893 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.82■□□□□ 0.92
Slc44a1Q6X893 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms