Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga7Q6DD96 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhga7Q6DD96 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga7Q6DD96 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga7Q6DD96 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga7Q6DD96 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga7Q6DD96 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga7Q6DD96 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhga7Q6DD96 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga7Q6DD96 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhga7Q6DD96 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga7Q6DD96 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga7Q6DD96 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhga7Q6DD96 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhga7Q6DD96 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdhga7Q6DD96 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga7Q6DD96 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga7Q6DD96 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga7Q6DD96 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga7Q6DD96 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhga7Q6DD96 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga7Q6DD96 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Gm7514-201ENSMUST00000209475 934 ntBASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga7Q6DD96 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga7Q6DD96 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga7Q6DD96 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga7Q6DD96 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga7Q6DD96 Gm22325-201ENSMUST00000158904 308 ntBASIC17.41■□□□□ 0.38
Pcdhga7Q6DD96 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Pcdhga7Q6DD96 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhga7Q6DD96 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga7Q6DD96 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga7Q6DD96 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga7Q6DD96 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga7Q6DD96 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga7Q6DD96 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.4■□□□□ 0.38
Pcdhga7Q6DD96 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhga7Q6DD96 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhga7Q6DD96 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhga7Q6DD96 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga7Q6DD96 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdhga7Q6DD96 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga7Q6DD96 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga7Q6DD96 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga7Q6DD96 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhga7Q6DD96 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga7Q6DD96 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhga7Q6DD96 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Gm42642-201ENSMUST00000200683 355 ntBASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Gm18671-201ENSMUST00000214826 683 ntBASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms