Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc3Q64519 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc3Q64519 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.27■□□□□ 0.35
Sdc3Q64519 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc3Q64519 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc3Q64519 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.26■□□□□ 0.35
Sdc3Q64519 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sdc3Q64519 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.26■□□□□ 0.35
Sdc3Q64519 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.26■□□□□ 0.35
Sdc3Q64519 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.26■□□□□ 0.35
Sdc3Q64519 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sdc3Q64519 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.26■□□□□ 0.35
Sdc3Q64519 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Gm10812-201ENSMUST00000099864 546 ntBASIC17.26■□□□□ 0.35
Sdc3Q64519 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.26■□□□□ 0.35
Sdc3Q64519 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc3Q64519 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.25■□□□□ 0.35
Sdc3Q64519 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sdc3Q64519 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc3Q64519 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.25■□□□□ 0.35
Sdc3Q64519 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.24■□□□□ 0.35
Sdc3Q64519 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc3Q64519 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc3Q64519 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc3Q64519 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Sdc3Q64519 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc3Q64519 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc3Q64519 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.24■□□□□ 0.35
Sdc3Q64519 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
Sdc3Q64519 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc3Q64519 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sdc3Q64519 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc3Q64519 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.24■□□□□ 0.35
Sdc3Q64519 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc3Q64519 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc3Q64519 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc3Q64519 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc3Q64519 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc3Q64519 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc3Q64519 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.23■□□□□ 0.35
Sdc3Q64519 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.23■□□□□ 0.35
Sdc3Q64519 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.23■□□□□ 0.35
Sdc3Q64519 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc3Q64519 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc3Q64519 BC021767-201ENSMUST00000126387 1716 ntBASIC17.23■□□□□ 0.35
Sdc3Q64519 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc3Q64519 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc3Q64519 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc3Q64519 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc3Q64519 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc3Q64519 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc3Q64519 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdc3Q64519 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc3Q64519 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc3Q64519 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc3Q64519 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sdc3Q64519 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sdc3Q64519 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sdc3Q64519 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.22■□□□□ 0.35
Sdc3Q64519 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc3Q64519 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc3Q64519 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc3Q64519 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc3Q64519 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc3Q64519 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.22■□□□□ 0.35
Sdc3Q64519 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.22■□□□□ 0.35
Sdc3Q64519 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc3Q64519 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sdc3Q64519 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sdc3Q64519 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Sdc3Q64519 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms