Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sox16Q62247 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Sox16Q62247 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sox16Q62247 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sox16Q62247 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Sox16Q62247 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sox16Q62247 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sox16Q62247 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sox16Q62247 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sox16Q62247 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.27□□□□□ -0.77
Sox16Q62247 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Sox16Q62247 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sox16Q62247 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Sox16Q62247 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sox16Q62247 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sox16Q62247 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 Hivep3-201ENSMUST00000084306 2973 ntBASIC10.26□□□□□ -0.77
Sox16Q62247 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sox16Q62247 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox16Q62247 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox16Q62247 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Sox16Q62247 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC10.25□□□□□ -0.77
Sox16Q62247 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sox16Q62247 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Sox16Q62247 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox16Q62247 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Sox16Q62247 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox16Q62247 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox16Q62247 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sox16Q62247 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox16Q62247 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC10.25□□□□□ -0.77
Sox16Q62247 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox16Q62247 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox16Q62247 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sox16Q62247 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox16Q62247 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sox16Q62247 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sox16Q62247 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Gm15853-202ENSMUST00000195518 2041 ntBASIC10.24□□□□□ -0.77
Sox16Q62247 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC10.24□□□□□ -0.77
Sox16Q62247 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.24□□□□□ -0.77
Sox16Q62247 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox16Q62247 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sox16Q62247 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Sox16Q62247 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox16Q62247 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms