Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim21Q62191 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim21Q62191 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim21Q62191 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim21Q62191 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trim21Q62191 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim21Q62191 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim21Q62191 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim21Q62191 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim21Q62191 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim21Q62191 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim21Q62191 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim21Q62191 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim21Q62191 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim21Q62191 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim21Q62191 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim21Q62191 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.97■□□□□ 0.63
Trim21Q62191 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim21Q62191 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim21Q62191 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim21Q62191 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.97■□□□□ 0.63
Trim21Q62191 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim21Q62191 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim21Q62191 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim21Q62191 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim21Q62191 Gm22325-201ENSMUST00000158904 308 ntBASIC18.96■□□□□ 0.63
Trim21Q62191 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim21Q62191 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim21Q62191 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim21Q62191 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim21Q62191 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Trim21Q62191 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim21Q62191 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim21Q62191 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim21Q62191 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim21Q62191 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim21Q62191 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim21Q62191 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Trim21Q62191 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim21Q62191 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.95■□□□□ 0.62
Trim21Q62191 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trim21Q62191 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Trim21Q62191 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trim21Q62191 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trim21Q62191 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trim21Q62191 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.95■□□□□ 0.62
Trim21Q62191 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim21Q62191 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim21Q62191 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Trim21Q62191 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim21Q62191 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim21Q62191 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim21Q62191 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim21Q62191 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim21Q62191 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
Trim21Q62191 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.94■□□□□ 0.62
Trim21Q62191 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim21Q62191 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim21Q62191 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim21Q62191 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim21Q62191 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trim21Q62191 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim21Q62191 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim21Q62191 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim21Q62191 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim21Q62191 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim21Q62191 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim21Q62191 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim21Q62191 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim21Q62191 AV356131-201ENSMUST00000206201 750 ntBASIC18.93■□□□□ 0.62
Trim21Q62191 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim21Q62191 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim21Q62191 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim21Q62191 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim21Q62191 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim21Q62191 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim21Q62191 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim21Q62191 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim21Q62191 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.92■□□□□ 0.62
Trim21Q62191 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim21Q62191 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.92■□□□□ 0.62
Trim21Q62191 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trim21Q62191 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms