Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sema3bQ62177 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sema3bQ62177 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Sema3bQ62177 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sema3bQ62177 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sema3bQ62177 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sema3bQ62177 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3bQ62177 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3bQ62177 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.1■□□□□ 0.33
Sema3bQ62177 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3bQ62177 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3bQ62177 Gm11927-201ENSMUST00000118472 759 ntBASIC17.1■□□□□ 0.33
Sema3bQ62177 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.1■□□□□ 0.33
Sema3bQ62177 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3bQ62177 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3bQ62177 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3bQ62177 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.1■□□□□ 0.33
Sema3bQ62177 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3bQ62177 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.1■□□□□ 0.33
Sema3bQ62177 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3bQ62177 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3bQ62177 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3bQ62177 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3bQ62177 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3bQ62177 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.09■□□□□ 0.33
Sema3bQ62177 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3bQ62177 Gm21814-202ENSMUST00000203277 873 ntBASIC17.09■□□□□ 0.33
Sema3bQ62177 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3bQ62177 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Sema3bQ62177 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.09■□□□□ 0.33
Sema3bQ62177 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3bQ62177 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3bQ62177 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3bQ62177 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3bQ62177 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3bQ62177 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3bQ62177 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3bQ62177 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.09■□□□□ 0.33
Sema3bQ62177 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3bQ62177 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sema3bQ62177 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sema3bQ62177 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sema3bQ62177 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3bQ62177 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3bQ62177 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3bQ62177 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sema3bQ62177 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Sema3bQ62177 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.08■□□□□ 0.32
Sema3bQ62177 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Sema3bQ62177 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.08■□□□□ 0.32
Sema3bQ62177 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sema3bQ62177 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3bQ62177 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3bQ62177 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3bQ62177 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3bQ62177 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3bQ62177 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3bQ62177 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3bQ62177 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3bQ62177 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3bQ62177 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.08■□□□□ 0.32
Sema3bQ62177 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sema3bQ62177 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sema3bQ62177 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sema3bQ62177 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sema3bQ62177 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sema3bQ62177 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.07■□□□□ 0.32
Sema3bQ62177 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sema3bQ62177 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sema3bQ62177 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sema3bQ62177 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sema3bQ62177 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sema3bQ62177 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sema3bQ62177 BC021767-201ENSMUST00000126387 1716 ntBASIC17.07■□□□□ 0.32
Sema3bQ62177 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sema3bQ62177 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sema3bQ62177 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sema3bQ62177 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sema3bQ62177 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.06■□□□□ 0.32
Sema3bQ62177 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sema3bQ62177 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sema3bQ62177 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sema3bQ62177 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sema3bQ62177 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.06■□□□□ 0.32
Sema3bQ62177 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sema3bQ62177 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.06■□□□□ 0.32
Sema3bQ62177 Gm30025-201ENSMUST00000218555 728 ntBASIC17.06■□□□□ 0.32
Sema3bQ62177 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sema3bQ62177 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sema3bQ62177 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sema3bQ62177 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sema3bQ62177 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sema3bQ62177 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sema3bQ62177 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sema3bQ62177 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sema3bQ62177 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sema3bQ62177 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sema3bQ62177 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.05■□□□□ 0.32
Sema3bQ62177 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sema3bQ62177 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms