Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sox17Q61473 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox17Q61473 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox17Q61473 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox17Q61473 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.9■□□□□ 0.3
Sox17Q61473 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Sox17Q61473 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox17Q61473 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sox17Q61473 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox17Q61473 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox17Q61473 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox17Q61473 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox17Q61473 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox17Q61473 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Sox17Q61473 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.89■□□□□ 0.29
Sox17Q61473 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox17Q61473 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sox17Q61473 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox17Q61473 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.89■□□□□ 0.29
Sox17Q61473 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox17Q61473 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox17Q61473 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sox17Q61473 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox17Q61473 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox17Q61473 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sox17Q61473 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.88■□□□□ 0.29
Sox17Q61473 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox17Q61473 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox17Q61473 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox17Q61473 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Sox17Q61473 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.88■□□□□ 0.29
Sox17Q61473 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox17Q61473 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.88■□□□□ 0.29
Sox17Q61473 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox17Q61473 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
Sox17Q61473 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox17Q61473 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox17Q61473 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox17Q61473 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox17Q61473 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox17Q61473 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox17Q61473 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sox17Q61473 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox17Q61473 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.87■□□□□ 0.29
Sox17Q61473 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox17Q61473 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sox17Q61473 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sox17Q61473 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sox17Q61473 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.87■□□□□ 0.29
Sox17Q61473 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox17Q61473 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox17Q61473 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox17Q61473 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox17Q61473 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Sox17Q61473 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Sox17Q61473 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.86■□□□□ 0.29
Sox17Q61473 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Sox17Q61473 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.86■□□□□ 0.29
Sox17Q61473 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.86■□□□□ 0.29
Sox17Q61473 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.86■□□□□ 0.29
Sox17Q61473 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.86■□□□□ 0.29
Sox17Q61473 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.86■□□□□ 0.29
Sox17Q61473 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox17Q61473 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.85■□□□□ 0.29
Sox17Q61473 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sox17Q61473 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms