Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cln3Q61124 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.81■□□□□ 0.76
Cln3Q61124 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.81■□□□□ 0.76
Cln3Q61124 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cln3Q61124 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.81■□□□□ 0.76
Cln3Q61124 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cln3Q61124 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cln3Q61124 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cln3Q61124 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cln3Q61124 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cln3Q61124 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.8■□□□□ 0.76
Cln3Q61124 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cln3Q61124 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cln3Q61124 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cln3Q61124 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cln3Q61124 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.8■□□□□ 0.76
Cln3Q61124 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cln3Q61124 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cln3Q61124 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.8■□□□□ 0.76
Cln3Q61124 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Cln3Q61124 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cln3Q61124 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.8■□□□□ 0.76
Cln3Q61124 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cln3Q61124 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cln3Q61124 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cln3Q61124 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Cln3Q61124 Gm10013-201ENSMUST00000106074 672 ntBASIC19.79■□□□□ 0.76
Cln3Q61124 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cln3Q61124 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cln3Q61124 Gm6345-202ENSMUST00000180900 204 ntBASIC19.79■□□□□ 0.76
Cln3Q61124 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cln3Q61124 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.79■□□□□ 0.76
Cln3Q61124 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cln3Q61124 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cln3Q61124 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.79■□□□□ 0.76
Cln3Q61124 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.79■□□□□ 0.76
Cln3Q61124 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cln3Q61124 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cln3Q61124 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cln3Q61124 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cln3Q61124 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.79■□□□□ 0.76
Cln3Q61124 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Cln3Q61124 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.79■□□□□ 0.76
Cln3Q61124 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cln3Q61124 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cln3Q61124 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cln3Q61124 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Cln3Q61124 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cln3Q61124 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cln3Q61124 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Cln3Q61124 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
Cln3Q61124 Mir5130-201ENSMUST00000175160 84 ntBASIC19.78■□□□□ 0.76
Cln3Q61124 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.78■□□□□ 0.76
Cln3Q61124 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.78■□□□□ 0.76
Cln3Q61124 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.78■□□□□ 0.76
Cln3Q61124 Gm4974-201ENSMUST00000209974 875 ntBASIC19.78■□□□□ 0.76
Cln3Q61124 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.78■□□□□ 0.76
Cln3Q61124 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cln3Q61124 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cln3Q61124 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cln3Q61124 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cln3Q61124 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Cln3Q61124 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cln3Q61124 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cln3Q61124 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cln3Q61124 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Cln3Q61124 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cln3Q61124 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cln3Q61124 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cln3Q61124 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cln3Q61124 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cln3Q61124 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cln3Q61124 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cln3Q61124 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cln3Q61124 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cln3Q61124 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cln3Q61124 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cln3Q61124 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.76■□□□□ 0.75
Cln3Q61124 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cln3Q61124 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cln3Q61124 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cln3Q61124 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cln3Q61124 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cln3Q61124 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cln3Q61124 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cln3Q61124 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cln3Q61124 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cln3Q61124 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cln3Q61124 Gm2274-201ENSMUST00000184539 609 ntBASIC19.75■□□□□ 0.75
Cln3Q61124 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.75■□□□□ 0.75
Cln3Q61124 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cln3Q61124 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cln3Q61124 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cln3Q61124 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cln3Q61124 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cln3Q61124 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cln3Q61124 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cln3Q61124 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cln3Q61124 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.74■□□□□ 0.75
Cln3Q61124 AA414768-201ENSMUST00000121924 1257 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms