Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Satb1Q60611 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Satb1Q60611 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Satb1Q60611 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.59■□□□□ 0.57
Satb1Q60611 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Satb1Q60611 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Satb1Q60611 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Satb1Q60611 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Satb1Q60611 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Satb1Q60611 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Satb1Q60611 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Satb1Q60611 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Satb1Q60611 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Satb1Q60611 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Satb1Q60611 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Satb1Q60611 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Satb1Q60611 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Satb1Q60611 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Satb1Q60611 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Satb1Q60611 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Satb1Q60611 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.58■□□□□ 0.56
Satb1Q60611 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.58■□□□□ 0.56
Satb1Q60611 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Satb1Q60611 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Satb1Q60611 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Satb1Q60611 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Satb1Q60611 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Satb1Q60611 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Satb1Q60611 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Satb1Q60611 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.57■□□□□ 0.56
Satb1Q60611 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Satb1Q60611 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Satb1Q60611 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Satb1Q60611 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Satb1Q60611 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Satb1Q60611 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Satb1Q60611 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Satb1Q60611 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Satb1Q60611 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Satb1Q60611 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Satb1Q60611 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Satb1Q60611 Gm6345-202ENSMUST00000180900 204 ntBASIC18.56■□□□□ 0.56
Satb1Q60611 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.56■□□□□ 0.56
Satb1Q60611 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Satb1Q60611 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Satb1Q60611 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Satb1Q60611 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Satb1Q60611 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Satb1Q60611 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Satb1Q60611 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Satb1Q60611 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Satb1Q60611 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Satb1Q60611 Gm10013-201ENSMUST00000106074 672 ntBASIC18.55■□□□□ 0.56
Satb1Q60611 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Satb1Q60611 AA414768-201ENSMUST00000121924 1257 ntBASIC18.55■□□□□ 0.56
Satb1Q60611 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Satb1Q60611 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Satb1Q60611 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Satb1Q60611 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Satb1Q60611 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Satb1Q60611 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Satb1Q60611 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Satb1Q60611 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Satb1Q60611 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Satb1Q60611 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Satb1Q60611 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Satb1Q60611 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.54■□□□□ 0.56
Satb1Q60611 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Satb1Q60611 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Satb1Q60611 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Satb1Q60611 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.54■□□□□ 0.56
Satb1Q60611 Gm14859-201ENSMUST00000117752 357 ntBASIC18.54■□□□□ 0.56
Satb1Q60611 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.54■□□□□ 0.56
Satb1Q60611 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Satb1Q60611 Ank2-226ENSMUST00000189368 339 ntBASIC18.54■□□□□ 0.56
Satb1Q60611 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Satb1Q60611 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Satb1Q60611 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Satb1Q60611 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Satb1Q60611 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Satb1Q60611 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.54■□□□□ 0.56
Satb1Q60611 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Satb1Q60611 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.53■□□□□ 0.56
Satb1Q60611 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.53■□□□□ 0.56
Satb1Q60611 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Satb1Q60611 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Satb1Q60611 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms