Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.78■□□□□ 0.92
Ccdc88aQ5SNZ0 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.78■□□□□ 0.92
Ccdc88aQ5SNZ0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc88aQ5SNZ0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc88aQ5SNZ0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc88aQ5SNZ0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Ccdc88aQ5SNZ0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc88aQ5SNZ0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc88aQ5SNZ0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc88aQ5SNZ0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.78■□□□□ 0.92
Ccdc88aQ5SNZ0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc88aQ5SNZ0 Gm18032-201ENSMUST00000222541 538 ntBASIC20.77■□□□□ 0.92
Ccdc88aQ5SNZ0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc88aQ5SNZ0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc88aQ5SNZ0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.77■□□□□ 0.92
Ccdc88aQ5SNZ0 Gm17971-201ENSMUST00000190239 806 ntBASIC20.77■□□□□ 0.92
Ccdc88aQ5SNZ0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc88aQ5SNZ0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc88aQ5SNZ0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc88aQ5SNZ0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc88aQ5SNZ0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.76■□□□□ 0.91
Ccdc88aQ5SNZ0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc88aQ5SNZ0 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.76■□□□□ 0.91
Ccdc88aQ5SNZ0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc88aQ5SNZ0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Ank2-226ENSMUST00000189368 339 ntBASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Gm18959-201ENSMUST00000208954 655 ntBASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc88aQ5SNZ0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc88aQ5SNZ0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc88aQ5SNZ0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ccdc88aQ5SNZ0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc88aQ5SNZ0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc88aQ5SNZ0 Gm10138-203ENSMUST00000206952 366 ntBASIC20.74■□□□□ 0.91
Ccdc88aQ5SNZ0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc88aQ5SNZ0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc88aQ5SNZ0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc88aQ5SNZ0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc88aQ5SNZ0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc88aQ5SNZ0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc88aQ5SNZ0 Gm9103-201ENSMUST00000119371 405 ntBASIC20.73■□□□□ 0.91
Ccdc88aQ5SNZ0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.73■□□□□ 0.91
Ccdc88aQ5SNZ0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc88aQ5SNZ0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc88aQ5SNZ0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc88aQ5SNZ0 Mir6349-201ENSMUST00000184059 97 ntBASIC20.73■□□□□ 0.91
Ccdc88aQ5SNZ0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.73■□□□□ 0.91
Ccdc88aQ5SNZ0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc88aQ5SNZ0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc88aQ5SNZ0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc88aQ5SNZ0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc88aQ5SNZ0 Tgds-204ENSMUST00000228543 1594 ntBASIC20.72■□□□□ 0.91
Ccdc88aQ5SNZ0 Gm43183-201ENSMUST00000200632 547 ntBASIC20.72■□□□□ 0.91
Ccdc88aQ5SNZ0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc88aQ5SNZ0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc88aQ5SNZ0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc88aQ5SNZ0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc88aQ5SNZ0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 AA414768-201ENSMUST00000121924 1257 ntBASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Odf3b-204ENSMUST00000227834 930 ntBASIC20.71■□□□□ 0.91
Ccdc88aQ5SNZ0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc88aQ5SNZ0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Ccdc88aQ5SNZ0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc88aQ5SNZ0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc88aQ5SNZ0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc88aQ5SNZ0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc88aQ5SNZ0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc88aQ5SNZ0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc88aQ5SNZ0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc88aQ5SNZ0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms