Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5d-4Q5R1F6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Tgds-204ENSMUST00000228543 1594 ntBASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5d-4Q5R1F6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Gm15039-201ENSMUST00000118914 875 ntBASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5d-4Q5R1F6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.46■□□□□ 0.06
Trav5d-4Q5R1F6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav5d-4Q5R1F6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav5d-4Q5R1F6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5d-4Q5R1F6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Gm27405-201ENSMUST00000184201 112 ntBASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Gm7291-201ENSMUST00000199147 382 ntBASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms