Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf43Q5NCP0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Gm10819-201ENSMUST00000099988 561 ntBASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf43Q5NCP0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf43Q5NCP0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf43Q5NCP0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf43Q5NCP0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf43Q5NCP0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rnf43Q5NCP0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf43Q5NCP0 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.29■□□□□ 0.52
Rnf43Q5NCP0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf43Q5NCP0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf43Q5NCP0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf43Q5NCP0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf43Q5NCP0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.29■□□□□ 0.52
Rnf43Q5NCP0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rnf43Q5NCP0 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.28■□□□□ 0.52
Rnf43Q5NCP0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rnf43Q5NCP0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf43Q5NCP0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rnf43Q5NCP0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.28■□□□□ 0.52
Rnf43Q5NCP0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf43Q5NCP0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf43Q5NCP0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rnf43Q5NCP0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf43Q5NCP0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf43Q5NCP0 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.27■□□□□ 0.52
Rnf43Q5NCP0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf43Q5NCP0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf43Q5NCP0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf43Q5NCP0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf43Q5NCP0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf43Q5NCP0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf43Q5NCP0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf43Q5NCP0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf43Q5NCP0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf43Q5NCP0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf43Q5NCP0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf43Q5NCP0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.26■□□□□ 0.51
Rnf43Q5NCP0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms