Protein–RNA interactions for Protein: Q5H8B9

Frem3, FRAS1-related extracellular matrix protein 3, mousemouse

Predictions only

Length 2,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem3Q5H8B9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Frem3Q5H8B9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Frem3Q5H8B9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Frem3Q5H8B9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Frem3Q5H8B9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Frem3Q5H8B9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Frem3Q5H8B9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Frem3Q5H8B9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Frem3Q5H8B9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Frem3Q5H8B9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Frem3Q5H8B9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Frem3Q5H8B9 Gm18101-201ENSMUST00000215769 548 ntBASIC18.27■□□□□ 0.52
Frem3Q5H8B9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Frem3Q5H8B9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Frem3Q5H8B9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Frem3Q5H8B9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.26■□□□□ 0.51
Frem3Q5H8B9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.26■□□□□ 0.51
Frem3Q5H8B9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Frem3Q5H8B9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.26■□□□□ 0.51
Frem3Q5H8B9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Frem3Q5H8B9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Frem3Q5H8B9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Frem3Q5H8B9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Frem3Q5H8B9 Gm2274-201ENSMUST00000184539 609 ntBASIC18.26■□□□□ 0.51
Frem3Q5H8B9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Frem3Q5H8B9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Frem3Q5H8B9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Frem3Q5H8B9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Frem3Q5H8B9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Frem3Q5H8B9 Gm33142-201ENSMUST00000193913 867 ntBASIC18.25■□□□□ 0.51
Frem3Q5H8B9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.25■□□□□ 0.51
Frem3Q5H8B9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Frem3Q5H8B9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Frem3Q5H8B9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Frem3Q5H8B9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Frem3Q5H8B9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Frem3Q5H8B9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Frem3Q5H8B9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Frem3Q5H8B9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Frem3Q5H8B9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Frem3Q5H8B9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Frem3Q5H8B9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Frem3Q5H8B9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Frem3Q5H8B9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Frem3Q5H8B9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Frem3Q5H8B9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Frem3Q5H8B9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Frem3Q5H8B9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Frem3Q5H8B9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Frem3Q5H8B9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Frem3Q5H8B9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.23■□□□□ 0.51
Frem3Q5H8B9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Frem3Q5H8B9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Frem3Q5H8B9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Frem3Q5H8B9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Frem3Q5H8B9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Frem3Q5H8B9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Frem3Q5H8B9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Frem3Q5H8B9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Frem3Q5H8B9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Gm16061-201ENSMUST00000122167 857 ntBASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.22■□□□□ 0.51
Frem3Q5H8B9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Frem3Q5H8B9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.21■□□□□ 0.51
Frem3Q5H8B9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Frem3Q5H8B9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Frem3Q5H8B9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.21■□□□□ 0.51
Frem3Q5H8B9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Frem3Q5H8B9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Frem3Q5H8B9 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.21■□□□□ 0.51
Frem3Q5H8B9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Frem3Q5H8B9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms