Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Pds5bQ4VA53 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pds5bQ4VA53 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pds5bQ4VA53 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pds5bQ4VA53 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pds5bQ4VA53 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pds5bQ4VA53 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
Pds5bQ4VA53 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
Pds5bQ4VA53 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pds5bQ4VA53 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC31.6■■■□□ 2.65
Pds5bQ4VA53 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC31.6■■■□□ 2.65
Pds5bQ4VA53 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pds5bQ4VA53 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Pds5bQ4VA53 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC31.6■■■□□ 2.65
Pds5bQ4VA53 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pds5bQ4VA53 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC31.6■■■□□ 2.65
Pds5bQ4VA53 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pds5bQ4VA53 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Pds5bQ4VA53 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC31.59■■■□□ 2.65
Pds5bQ4VA53 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Pds5bQ4VA53 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Pds5bQ4VA53 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Pds5bQ4VA53 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Pds5bQ4VA53 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
Pds5bQ4VA53 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Pds5bQ4VA53 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Pds5bQ4VA53 AC124603.1-201ENSMUST00000223843 308 ntBASIC31.58■■■□□ 2.65
Pds5bQ4VA53 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
Pds5bQ4VA53 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Pds5bQ4VA53 Gm15794-201ENSMUST00000120182 631 ntBASIC31.58■■■□□ 2.65
Pds5bQ4VA53 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Pds5bQ4VA53 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Pds5bQ4VA53 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC31.58■■■□□ 2.65
Pds5bQ4VA53 AC124569.2-201ENSMUST00000225998 818 ntBASIC31.58■■■□□ 2.65
Pds5bQ4VA53 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
Pds5bQ4VA53 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Pds5bQ4VA53 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pds5bQ4VA53 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC31.57■■■□□ 2.64
Pds5bQ4VA53 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
Pds5bQ4VA53 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pds5bQ4VA53 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pds5bQ4VA53 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pds5bQ4VA53 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Pds5bQ4VA53 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC31.56■■■□□ 2.64
Pds5bQ4VA53 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pds5bQ4VA53 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pds5bQ4VA53 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pds5bQ4VA53 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Pds5bQ4VA53 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Pds5bQ4VA53 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC31.55■■■□□ 2.64
Pds5bQ4VA53 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pds5bQ4VA53 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pds5bQ4VA53 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Pds5bQ4VA53 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pds5bQ4VA53 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pds5bQ4VA53 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Pds5bQ4VA53 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Pds5bQ4VA53 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC31.54■■■□□ 2.64
Pds5bQ4VA53 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Pds5bQ4VA53 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Gm38345-201ENSMUST00000192635 1748 ntBASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Actl10-202ENSMUST00000226583 1501 ntBASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Gm37025-201ENSMUST00000195159 829 ntBASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Gm18195-201ENSMUST00000207604 706 ntBASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Pds5bQ4VA53 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pds5bQ4VA53 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Gm13401-201ENSMUST00000117074 291 ntBASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Gm12895-201ENSMUST00000122214 226 ntBASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Pds5bQ4VA53 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.64
Pds5bQ4VA53 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
Pds5bQ4VA53 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Pds5bQ4VA53 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Pds5bQ4VA53 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.64
Pds5bQ4VA53 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC31.51■■■□□ 2.64
Pds5bQ4VA53 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Pds5bQ4VA53 Gm9449-201ENSMUST00000207265 1011 ntBASIC31.51■■■□□ 2.64
Pds5bQ4VA53 AC120002.2-201ENSMUST00000220205 773 ntBASIC31.51■■■□□ 2.64
Pds5bQ4VA53 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Pds5bQ4VA53 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Pds5bQ4VA53 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Pds5bQ4VA53 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Pds5bQ4VA53 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms