Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.1■□□□□ 0.49
Usp30Q3UN04 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Gm43799-201ENSMUST00000201845 579 ntBASIC18.1■□□□□ 0.49
Usp30Q3UN04 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Gm9987-201ENSMUST00000069768 567 ntBASIC18.1■□□□□ 0.49
Usp30Q3UN04 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.1■□□□□ 0.49
Usp30Q3UN04 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Usp30Q3UN04 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Usp30Q3UN04 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.09■□□□□ 0.49
Usp30Q3UN04 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp30Q3UN04 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Usp30Q3UN04 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp30Q3UN04 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp30Q3UN04 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.09■□□□□ 0.49
Usp30Q3UN04 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp30Q3UN04 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp30Q3UN04 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp30Q3UN04 Gm30025-201ENSMUST00000218555 728 ntBASIC18.09■□□□□ 0.49
Usp30Q3UN04 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp30Q3UN04 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp30Q3UN04 BC021767-201ENSMUST00000126387 1716 ntBASIC18.09■□□□□ 0.49
Usp30Q3UN04 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp30Q3UN04 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp30Q3UN04 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp30Q3UN04 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp30Q3UN04 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp30Q3UN04 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Usp30Q3UN04 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.08■□□□□ 0.48
Usp30Q3UN04 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp30Q3UN04 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.08■□□□□ 0.48
Usp30Q3UN04 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp30Q3UN04 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Usp30Q3UN04 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.08■□□□□ 0.48
Usp30Q3UN04 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp30Q3UN04 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp30Q3UN04 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp30Q3UN04 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp30Q3UN04 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp30Q3UN04 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp30Q3UN04 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp30Q3UN04 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
Usp30Q3UN04 Gm3375-201ENSMUST00000203929 796 ntBASIC18.06■□□□□ 0.48
Usp30Q3UN04 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.06■□□□□ 0.48
Usp30Q3UN04 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp30Q3UN04 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp30Q3UN04 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp30Q3UN04 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp30Q3UN04 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Usp30Q3UN04 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp30Q3UN04 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Usp30Q3UN04 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.06■□□□□ 0.48
Usp30Q3UN04 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.05■□□□□ 0.48
Usp30Q3UN04 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp30Q3UN04 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp30Q3UN04 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp30Q3UN04 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Usp30Q3UN04 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.05■□□□□ 0.48
Usp30Q3UN04 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp30Q3UN04 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp30Q3UN04 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp30Q3UN04 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.05■□□□□ 0.48
Usp30Q3UN04 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.05■□□□□ 0.48
Usp30Q3UN04 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp30Q3UN04 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp30Q3UN04 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.04■□□□□ 0.48
Usp30Q3UN04 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp30Q3UN04 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp30Q3UN04 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp30Q3UN04 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms