Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops9Q3U898 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cops9Q3U898 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.42□□□□□ -0.42
Cops9Q3U898 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cops9Q3U898 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.42□□□□□ -0.42
Cops9Q3U898 Gm45444-201ENSMUST00000211394 898 ntBASIC12.42□□□□□ -0.42
Cops9Q3U898 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cops9Q3U898 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.42□□□□□ -0.42
Cops9Q3U898 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cops9Q3U898 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cops9Q3U898 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cops9Q3U898 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cops9Q3U898 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.41□□□□□ -0.42
Cops9Q3U898 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cops9Q3U898 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.41□□□□□ -0.42
Cops9Q3U898 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cops9Q3U898 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cops9Q3U898 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cops9Q3U898 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cops9Q3U898 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cops9Q3U898 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cops9Q3U898 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.4□□□□□ -0.42
Cops9Q3U898 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC12.4□□□□□ -0.42
Cops9Q3U898 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.4□□□□□ -0.42
Cops9Q3U898 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.4□□□□□ -0.42
Cops9Q3U898 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.4□□□□□ -0.42
Cops9Q3U898 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.4□□□□□ -0.42
Cops9Q3U898 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.4□□□□□ -0.42
Cops9Q3U898 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Cops9Q3U898 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cops9Q3U898 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.43
Cops9Q3U898 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.43
Cops9Q3U898 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cops9Q3U898 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cops9Q3U898 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops9Q3U898 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops9Q3U898 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cops9Q3U898 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.39□□□□□ -0.43
Cops9Q3U898 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cops9Q3U898 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops9Q3U898 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops9Q3U898 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops9Q3U898 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops9Q3U898 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.39□□□□□ -0.43
Cops9Q3U898 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.39□□□□□ -0.43
Cops9Q3U898 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops9Q3U898 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC12.39□□□□□ -0.43
Cops9Q3U898 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cops9Q3U898 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cops9Q3U898 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cops9Q3U898 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cops9Q3U898 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms